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Widespread adoption of electronic health records (EHRs) has fueled the development of using machine learning to build prediction models for various clinical outcomes. However, this process is often constrained by having a relatively small number of patient records for training the model. We demonstrate that using patient representation schemes inspired from techniques in natural language processing can increase the accuracy…
This work demonstrates how organizational resources, in the form of aggregate statistics, knowledge bases, and existing services can be used to connect new and existing data modalities.
Electrophysiological signals exhibit both periodic and aperiodic properties. Periodic oscillations have been linked to numerous physiological, cognitive, behavioral and disease states. Emerging evidence demonstrates that the aperiodic component has putative physiological interpretations and that it dynamically changes with age, task demands and cognitive states. Electrophysiological neural activity is typically analyzed using canonically defined frequency bands, without consideration of the aperiodic…
Introducing FlyingSquid, a weak supervision framework that runs orders of magnitude faster than previous weak supervision approaches and requires fewer assumptions
This paper proposes cross-modal data programming (XMDP) for machine learning (ML) in medicine.
This paper provides a series of results studying how performance scales with changes in source coverage, source accuracy, and the Lipschitzness of label distributions in the embedding space, and compare this rate to standard weak supervision.
Presenting Trove, a framework for weakly supervised entity classification using medical ontologies and expert-generated rules.
Background: The aortic valve is an important determinant of cardiovascular physiology and anatomic location of common human diseases. Methods: From a sample of 34 287 white British ancestry participants, we estimated functional aortic valve area by planimetry from prospectively obtained cardiac magnetic resonance imaging sequences of the aortic valve. Aortic valve area measurements were submitted to genome-wide association testing, followed by…


In this paper, we propose a learning algorithm for training deep neural networks when there is not sufficient labeled data. To improve the generalization capabilities of the deep model, we adopt a learning scheme to train two related tasks simultaneously. One is the original task (target), and the other is an auxiliary task (source). In order to create a related…
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